1.103.0

This PR aims to fix #16895, caused by a regression in #7 and not fixed
by #16903. The PR #16903 only fixes a starvation issue, where the CPU
isn't released. There is a second issue, where the execution is blocked.
This theory is supported by the flame graphs provided in #16895 and the
fact that I see the CPU usage reducing and far below the limit.

Since the changes in #7, the method `check_state_independent_auth_rules`
is called with the additional parameter `batched_auth_events`:


6fa13b4f92/synapse/handlers/federation_event.py (L1741-L1743)


It makes the execution enter this if clause, introduced with #15195


6fa13b4f92/synapse/event_auth.py (L178-L189)

There are two issues in the above code snippet.

First, there is the blocking issue. I'm not entirely sure if this is a
deadlock, starvation, or something different. In the beginning, I
thought the copy operation was responsible. It wasn't. Then I
investigated the nested `store.get_events` inside the function `update`.
This was also not causing the blocking issue. Only when I replaced the
set difference operation (`-` ) with a list comprehension, the blocking
was resolved. Creating and comparing sets with a very large amount of
events seems to be problematic.

This is how the flamegraph looks now while persisting outliers. As you
can see, the execution no longer locks up in the above function.

![output_2024-02-28_13-59-40](https://github.com/element-hq/synapse/assets/13143850/6db9c9ac-484f-47d0-bdde-70abfbd773ec)

Second, the copying here doesn't serve any purpose, because only a
shallow copy is created. This means the same objects from the original
dict are referenced. This fails the intention of protecting these
objects from mutation. The review of the original PR
https://github.com/matrix-org/synapse/pull/15195 had an extensive
discussion about this matter.

Various approaches to copying the auth_events were attempted:
1) Implementing a deepcopy caused issues due to
builtins.EventInternalMetadata not being pickleable.
2) Creating a dict with new objects akin to a deepcopy.
3) Creating a dict with new objects containing only necessary
attributes.

Concluding, there is no easy way to create an actual copy of the
objects. Opting for a deepcopy can significantly strain memory and CPU
resources, making it an inefficient choice. I don't see why the copy is
necessary in the first place. Therefore I'm proposing to remove it
altogether.

After these changes, I was able to successfully join these rooms,
without the main worker locking up:
- #synapse:matrix.org
- #element-android:matrix.org
- #element-web:matrix.org
- #ecips:matrix.org
- #ipfs-chatter:ipfs.io
- #python:matrix.org
- #matrix:matrix.org

.github/workflows/docker.yml

@@ -30,7 +30,7 @@ jobs:
         run: docker buildx inspect
 
       - name: Install Cosign
-        uses: sigstore/cosign-installer@v3.3.0
+        uses: sigstore/cosign-installer@v3.4.0
 
       - name: Checkout repository
         uses: actions/checkout@v4

.github/workflows/docs-pr-netlify.yaml

@@ -14,7 +14,7 @@ jobs:
       # There's a 'download artifact' action, but it hasn't been updated for the workflow_run action
       # (https://github.com/actions/download-artifact/issues/60) so instead we get this mess:
       - name: 📥 Download artifact
-        uses: dawidd6/action-download-artifact@e7466d1a7587ed14867642c2ca74b5bcc1e19a2d # v3.0.0
+        uses: dawidd6/action-download-artifact@72aaadce3bc708349fc665eee3785cbb1b6e51d0 # v3.1.1
         with:
           workflow: docs-pr.yaml
           run_id: ${{ github.event.workflow_run.id }}

.github/workflows/docs.yaml

@@ -9,7 +9,6 @@ on:
       - 'release-v*'
       # stable docs
       - master
-  pull_request:
 
   workflow_dispatch:
 
@@ -80,12 +79,12 @@ jobs:
           cp book/welcome_and_overview.html book/index.html
 
       # Deploy to the target directory.
-#      - name: Deploy to gh pages
-#        uses: peaceiris/actions-gh-pages@373f7f263a76c20808c831209c920827a82a2847 # v3.9.3
-#        with:
-#          github_token: ${{ secrets.GITHUB_TOKEN }}
-#          publish_dir: ./book
-#          destination_dir: ./${{ needs.pre.outputs.branch-version }}
+      - name: Deploy to gh pages
+        uses: peaceiris/actions-gh-pages@373f7f263a76c20808c831209c920827a82a2847 # v3.9.3
+        with:
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: ./book
+          destination_dir: ./${{ needs.pre.outputs.branch-version }}
 
 ################################################################################
   pages-devdocs:
@@ -99,7 +98,7 @@ jobs:
       - name: "Set up Sphinx"
         uses: matrix-org/setup-python-poetry@v1
         with:
-          python-version: "3.11"
+          python-version: "3.x"
           poetry-version: "1.3.2"
           groups: "dev-docs"
           extras: ""
@@ -110,9 +109,9 @@ jobs:
           poetry run make html
 
       # Deploy to the target directory.
-#      - name: Deploy to gh pages
-#        uses: peaceiris/actions-gh-pages@373f7f263a76c20808c831209c920827a82a2847 # v3.9.3
-#        with:
-#          github_token: ${{ secrets.GITHUB_TOKEN }}
-#          publish_dir: ./dev-docs/_build/html
-#          destination_dir: ./dev-docs/${{ needs.pre.outputs.branch-version }}
+      - name: Deploy to gh pages
+        uses: peaceiris/actions-gh-pages@373f7f263a76c20808c831209c920827a82a2847 # v3.9.3
+        with:
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: ./dev-docs/_build/html
+          destination_dir: ./dev-docs/${{ needs.pre.outputs.branch-version }}

.github/workflows/latest_deps.yml

@@ -226,7 +226,7 @@ jobs:
 
     steps:
       - uses: actions/checkout@v4
-      - uses: JasonEtco/create-an-issue@e27dddc79c92bc6e4562f268fffa5ed752639abd # v2.9.1
+      - uses: JasonEtco/create-an-issue@1b14a70e4d8dc185e5cc76d3bec9eab20257b2c5 # v2.9.2
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         with:

.github/workflows/tests.yml

@@ -22,7 +22,7 @@ jobs:
       integration: ${{ !startsWith(github.ref, 'refs/pull/') || steps.filter.outputs.integration }}
       linting: ${{ !startsWith(github.ref, 'refs/pull/') || steps.filter.outputs.linting }}
     steps:
-    - uses: dorny/paths-filter@v2
+    - uses: dorny/paths-filter@v3
       id: filter
       # We only check on PRs
       if: startsWith(github.ref, 'refs/pull/')

.github/workflows/twisted_trunk.yml

@@ -207,7 +207,7 @@ jobs:
 
     steps:
       - uses: actions/checkout@v4
-      - uses: JasonEtco/create-an-issue@e27dddc79c92bc6e4562f268fffa5ed752639abd # v2.9.1
+      - uses: JasonEtco/create-an-issue@1b14a70e4d8dc185e5cc76d3bec9eab20257b2c5 # v2.9.2
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         with:

CHANGES.md

@@ -1,3 +1,125 @@
+# Synapse 1.103.0 (2024-03-19)
+
+No significant changes since 1.103.0rc1.
+
+
+
+
+# Synapse 1.103.0rc1 (2024-03-12)
+
+### Features
+
+- Add a new [List Accounts v3](https://element-hq.github.io/synapse/v1.103/admin_api/user_admin_api.html#list-accounts-v3) Admin API with improved deactivated user filtering capabilities. ([\#16874](https://github.com/element-hq/synapse/issues/16874))
+- Include `Retry-After` header by default per [MSC4041](https://github.com/matrix-org/matrix-spec-proposals/pull/4041). Contributed by @clokep. ([\#16947](https://github.com/element-hq/synapse/issues/16947))
+
+### Bugfixes
+
+- Fix joining remote rooms when a module uses the `on_new_event` callback. This callback may now pass partial state events instead of the full state for remote rooms. Introduced in v1.76.0. ([\#16973](https://github.com/element-hq/synapse/issues/16973))
+- Fix performance issue when joining very large rooms that can cause the server to lock up. Introduced in v1.100.0. Contributed by @ggogel. ([\#16968](https://github.com/element-hq/synapse/issues/16968))
+
+### Improved Documentation
+
+- Add HAProxy example for single port operation to reverse proxy documentation. Contributed by Georg Pfuetzenreuter (@tacerus). ([\#16768](https://github.com/element-hq/synapse/issues/16768))
+- Improve the documentation around running Complement tests with new configuration parameters. ([\#16946](https://github.com/element-hq/synapse/issues/16946))
+- Add docs on upgrading from a very old version. ([\#16951](https://github.com/element-hq/synapse/issues/16951))
+
+
+### Updates to locked dependencies
+
+* Bump JasonEtco/create-an-issue from 2.9.1 to 2.9.2. ([\#16934](https://github.com/element-hq/synapse/issues/16934))
+* Bump anyhow from 1.0.79 to 1.0.80. ([\#16935](https://github.com/element-hq/synapse/issues/16935))
+* Bump dawidd6/action-download-artifact from 3.0.0 to 3.1.1. ([\#16933](https://github.com/element-hq/synapse/issues/16933))
+* Bump furo from 2023.9.10 to 2024.1.29. ([\#16939](https://github.com/element-hq/synapse/issues/16939))
+* Bump pyopenssl from 23.3.0 to 24.0.0. ([\#16937](https://github.com/element-hq/synapse/issues/16937))
+* Bump types-netaddr from 0.10.0.20240106 to 1.2.0.20240219. ([\#16938](https://github.com/element-hq/synapse/issues/16938))
+
+
+# Synapse 1.102.0 (2024-03-05)
+
+### Bugfixes
+
+- Revert https://github.com/element-hq/synapse/pull/16756, which caused incorrect notification counts on mobile clients since v1.100.0. ([\#16979](https://github.com/element-hq/synapse/issues/16979))
+
+
+# Synapse 1.102.0rc1 (2024-02-20)
+
+### Features
+
+- A metric was added for emails sent by Synapse, broken down by type: `synapse_emails_sent_total`. Contributed by Remi Rampin. ([\#16881](https://github.com/element-hq/synapse/issues/16881))
+
+### Bugfixes
+
+- Do not send multiple concurrent requests for keys for the same server. ([\#16894](https://github.com/element-hq/synapse/issues/16894))
+- Fix performance issue when joining very large rooms that can cause the server to lock up. Introduced in v1.100.0. ([\#16903](https://github.com/element-hq/synapse/issues/16903))
+- Always prefer unthreaded receipt when >1 exist ([MSC4102](https://github.com/matrix-org/matrix-spec-proposals/pull/4102)). ([\#16927](https://github.com/element-hq/synapse/issues/16927))
+
+### Improved Documentation
+
+- Fix a small typo in the Rooms section of the Admin API documentation. Contributed by @RainerZufall187. ([\#16857](https://github.com/element-hq/synapse/issues/16857))
+
+### Internal Changes
+
+- Don't invalidate the entire event cache when we purge history. ([\#16905](https://github.com/element-hq/synapse/issues/16905))
+- Add experimental config option to not send device list updates for specific users. ([\#16909](https://github.com/element-hq/synapse/issues/16909))
+- Fix incorrect docker hub link in release script. ([\#16910](https://github.com/element-hq/synapse/issues/16910))
+
+
+
+### Updates to locked dependencies
+
+* Bump attrs from 23.1.0 to 23.2.0. ([\#16899](https://github.com/element-hq/synapse/issues/16899))
+* Bump bcrypt from 4.0.1 to 4.1.2. ([\#16900](https://github.com/element-hq/synapse/issues/16900))
+* Bump pygithub from 2.1.1 to 2.2.0. ([\#16902](https://github.com/element-hq/synapse/issues/16902))
+* Bump sentry-sdk from 1.40.0 to 1.40.3. ([\#16898](https://github.com/element-hq/synapse/issues/16898))
+
+# Synapse 1.101.0 (2024-02-13)
+
+### Bugfixes
+
+- Fix performance regression when fetching auth chains from the DB. Introduced in v1.100.0. ([\#16893](https://github.com/element-hq/synapse/issues/16893))
+
+
+
+
+# Synapse 1.101.0rc1 (2024-02-06)
+
+### Improved Documentation
+
+- Fix broken links in the documentation. ([\#16853](https://github.com/element-hq/synapse/issues/16853))
+- Update MacOS installation instructions to mention that libicu is optional. ([\#16854](https://github.com/element-hq/synapse/issues/16854))
+- The version picker now correctly lists versions after `v1.98.0`. ([\#16880](https://github.com/element-hq/synapse/issues/16880))
+
+### Internal Changes
+
+- Add support for stabilised [MSC3981](https://github.com/matrix-org/matrix-spec-proposals/pull/3981) that adds a `recurse` parameter on the `/relations` API. ([\#16842](https://github.com/element-hq/synapse/issues/16842))
+
+
+
+### Updates to locked dependencies
+
+* Bump dorny/paths-filter from 2 to 3. ([\#16869](https://github.com/element-hq/synapse/issues/16869))
+* Bump gitpython from 3.1.40 to 3.1.41. ([\#16850](https://github.com/element-hq/synapse/issues/16850))
+* Bump hiredis from 2.2.3 to 2.3.2. ([\#16862](https://github.com/element-hq/synapse/issues/16862))
+* Bump jsonschema from 4.20.0 to 4.21.1. ([\#16887](https://github.com/element-hq/synapse/issues/16887))
+* Bump lxml-stubs from 0.4.0 to 0.5.1. ([\#16885](https://github.com/element-hq/synapse/issues/16885))
+* Bump mypy-zope from 1.0.1 to 1.0.3. ([\#16865](https://github.com/element-hq/synapse/issues/16865))
+* Bump phonenumbers from 8.13.26 to 8.13.29. ([\#16868](https://github.com/element-hq/synapse/issues/16868))
+* Bump pydantic from 2.5.3 to 2.6.0. ([\#16888](https://github.com/element-hq/synapse/issues/16888))
+* Bump sentry-sdk from 1.39.1 to 1.40.0. ([\#16889](https://github.com/element-hq/synapse/issues/16889))
+* Bump serde from 1.0.195 to 1.0.196. ([\#16867](https://github.com/element-hq/synapse/issues/16867))
+* Bump serde_json from 1.0.111 to 1.0.113. ([\#16866](https://github.com/element-hq/synapse/issues/16866))
+* Bump sigstore/cosign-installer from 3.3.0 to 3.4.0. ([\#16890](https://github.com/element-hq/synapse/issues/16890))
+* Bump types-pillow from 10.1.0.2 to 10.2.0.20240125. ([\#16864](https://github.com/element-hq/synapse/issues/16864))
+* Bump types-requests from 2.31.0.10 to 2.31.0.20240125. ([\#16886](https://github.com/element-hq/synapse/issues/16886))
+* Bump types-setuptools from 69.0.0.0 to 69.0.0.20240125. ([\#16863](https://github.com/element-hq/synapse/issues/16863))
+
+# Synapse 1.100.0 (2024-01-30)
+
+No significant changes since 1.100.0rc3.
+
+
+
+
 # Synapse 1.100.0rc3 (2024-01-24)
 
 ### Bugfixes

Cargo.lock

@@ -13,9 +13,9 @@ dependencies = [
 
 [[package]]
 name = "anyhow"
-version = "1.0.79"
+version = "1.0.80"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "080e9890a082662b09c1ad45f567faeeb47f22b5fb23895fbe1e651e718e25ca"
+checksum = "5ad32ce52e4161730f7098c077cd2ed6229b5804ccf99e5366be1ab72a98b4e1"
 
 [[package]]
 name = "arc-swap"
@@ -339,18 +339,18 @@ checksum = "d29ab0c6d3fc0ee92fe66e2d99f700eab17a8d57d1c1d3b748380fb20baa78cd"
 
 [[package]]
 name = "serde"
-version = "1.0.195"
+version = "1.0.196"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "63261df402c67811e9ac6def069e4786148c4563f4b50fd4bf30aa370d626b02"
+checksum = "870026e60fa08c69f064aa766c10f10b1d62db9ccd4d0abb206472bee0ce3b32"
 dependencies = [
  "serde_derive",
 ]
 
 [[package]]
 name = "serde_derive"
-version = "1.0.195"
+version = "1.0.196"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "46fe8f8603d81ba86327b23a2e9cdf49e1255fb94a4c5f297f6ee0547178ea2c"
+checksum = "33c85360c95e7d137454dc81d9a4ed2b8efd8fbe19cee57357b32b9771fccb67"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -359,9 +359,9 @@ dependencies = [
 
 [[package]]
 name = "serde_json"
-version = "1.0.111"
+version = "1.0.113"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "176e46fa42316f18edd598015a5166857fc835ec732f5215eac6b7bdbf0a84f4"
+checksum = "69801b70b1c3dac963ecb03a364ba0ceda9cf60c71cfe475e99864759c8b8a79"
 dependencies = [
  "itoa",
  "ryu",

changelog.d/16856.doc

@@ -1 +0,0 @@
-Fix building the developer documentation on the `develop` branch.

debian/changelog

@@ -1,3 +1,45 @@
+matrix-synapse-py3 (1.103.0) stable; urgency=medium
+
+  * New Synapse release 1.103.0.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 19 Mar 2024 12:24:36 +0000
+
+matrix-synapse-py3 (1.103.0~rc1) stable; urgency=medium
+
+  * New Synapse release 1.103.0rc1.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 12 Mar 2024 15:02:56 +0000
+
+matrix-synapse-py3 (1.102.0) stable; urgency=medium
+
+  * New Synapse release 1.102.0.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 05 Mar 2024 14:47:03 +0000
+
+matrix-synapse-py3 (1.102.0~rc1) stable; urgency=medium
+
+  * New Synapse release 1.102.0rc1.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 20 Feb 2024 15:50:36 +0000
+
+matrix-synapse-py3 (1.101.0) stable; urgency=medium
+
+  * New Synapse release 1.101.0.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 13 Feb 2024 10:45:35 +0000
+
+matrix-synapse-py3 (1.101.0~rc1) stable; urgency=medium
+
+  * New Synapse release 1.101.0rc1.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 06 Feb 2024 16:02:02 +0000
+
+matrix-synapse-py3 (1.100.0) stable; urgency=medium
+
+  * New Synapse release 1.100.0.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 30 Jan 2024 16:58:19 +0000
+
 matrix-synapse-py3 (1.100.0~rc3) stable; urgency=medium
 
   * New Synapse release 1.100.0rc3.

docker/complement/README.md

@@ -30,3 +30,14 @@ Consult `scripts-dev/complement.sh` in the repository root for a real example.
 
 [complement]: https://github.com/matrix-org/complement
 [complementEnv]: https://github.com/matrix-org/complement/pull/382
+
+## How to modify homeserver.yaml for Complement tests
+
+It's common for MSCs to be gated behind a feature flag like this:
+```yaml
+experimental_features:
+  faster_joins: true
+```
+To modify this for the Complement image, modify `./conf/workers-shared-extra.yaml.j2`. Despite the name,
+this will affect non-worker mode as well. Remember to _rebuild_ the image (so don't use `-e` if using
+`complement.sh`).

docs/admin_api/rooms.md

@@ -913,7 +913,7 @@ With all that being said, if you still want to try and recover the room:
    them handle rejoining themselves.
 
 4. If `new_room_user_id` was given, a 'Content Violation' will have been
-   created. Consider whether you want to delete that roomm.
+   created. Consider whether you want to delete that room.
 
 # Make Room Admin API
 

docs/admin_api/user_admin_api.md

@@ -164,6 +164,7 @@ Body parameters:
   Other allowed options are: `bot` and `support`.
 
 ## List Accounts
+### List Accounts (V2)
 
 This API returns all local user accounts.
 By default, the response is ordered by ascending user ID.
@@ -287,6 +288,19 @@ The following fields are returned in the JSON response body:
 
 *Added in Synapse 1.93:* the `locked` query parameter and response field.
 
+### List Accounts (V3)
+
+This API returns all local user accounts (see v2). In contrast to v2, the query parameter `deactivated` is handled differently.
+
+```
+GET /_synapse/admin/v3/users
+```
+
+**Parameters**
+- `deactivated` - Optional flag to filter deactivated users. If `true`, only deactivated users are returned.
+  If `false`, deactivated users are excluded from the query. When the flag is absent (the default),
+  users are not filtered by deactivation status.
+
 ## Query current sessions for a user
 
 This API returns information about the active sessions for a specific user.

docs/development/contributing_guide.md

@@ -329,7 +329,7 @@ This configuration should generally cover your needs.
 - To run with Postgres, supply the `-e POSTGRES=1 -e MULTI_POSTGRES=1` environment flags.
 - To run with Synapse in worker mode, supply the `-e WORKERS=1 -e REDIS=1` environment flags (in addition to the Postgres flags).
 
-For more details about other configurations, see the [Docker-specific documentation in the SyTest repo](https://github.com/vector-im/sytest/blob/develop/docker/README.md).
+For more details about other configurations, see the [Docker-specific documentation in the SyTest repo](https://github.com/matrix-org/sytest/blob/develop/docker/README.md).
 
 
 ## Run the integration tests ([Complement](https://github.com/matrix-org/complement)).

docs/modules/third_party_rules_callbacks.md

@@ -142,6 +142,10 @@ Called after sending an event into a room. The module is passed the event, as we
 as the state of the room _after_ the event. This means that if the event is a state event,
 it will be included in this state.
 
+The state map may not be complete if Synapse hasn't yet loaded the full state
+of the room. This can happen for events in rooms that were just joined from
+a remote server.
+
 Note that this callback is called when the event has already been processed and stored
 into the room, which means this callback cannot be used to deny persisting the event. To
 deny an incoming event, see [`check_event_for_spam`](spam_checker_callbacks.md#check_event_for_spam) instead.

docs/other/running_synapse_on_single_board_computers.md

@@ -12,7 +12,7 @@ This is the main reason people have a poor matrix experience on resource constra
 
 While synapse does have some performance issues with presence [#3971](https://github.com/matrix-org/synapse/issues/3971), the fundamental problem is that this is an easy feature to implement for a centralised service at nearly no overhead, but federation makes it combinatorial [#8055](https://github.com/matrix-org/synapse/issues/8055). There is also a client-side config option which disables the UI and idle tracking [enable_presence_by_hs_url] to blacklist the largest instances but I didn't notice much difference, so I recommend disabling the feature entirely at the server level as well.
 
-[enable_presence_by_hs_url]: https://github.com/vector-im/element-web/blob/v1.7.8/config.sample.json#L45
+[enable_presence_by_hs_url]: https://github.com/element-hq/element-web/blob/v1.7.8/config.sample.json#L45
 
 ### Joining
 

docs/reverse_proxy.md

@@ -186,6 +186,25 @@ Example configuration, if using a UNIX socket. The configuration lines regarding
 backend matrix
   server matrix unix@/run/synapse/main_public.sock
 ```
+Example configuration when using a single port for both client and federation traffic.
+```
+frontend https
+  bind *:443,[::]:443 ssl crt /etc/ssl/haproxy/ strict-sni alpn h2,http/1.1
+  http-request set-header X-Forwarded-Proto https if { ssl_fc }
+  http-request set-header X-Forwarded-Proto http  if !{ ssl_fc }
+  http-request set-header X-Forwarded-For %[src]
+
+  acl matrix-host hdr(host) -i matrix.example.com matrix.example.com:443
+  acl matrix-sni  ssl_fc_sni   matrix.example.com
+  acl matrix-path path_beg     /_matrix
+  acl matrix-path path_beg     /_synapse/client
+
+  use_backend matrix if matrix-host matrix-path
+  use_backend matrix if matrix-sni
+
+backend matrix
+  server matrix 127.0.0.1:8008
+```
 
 [Delegation](delegate.md) example:
 ```

docs/setup/installation.md

@@ -326,6 +326,17 @@ Some extra dependencies may be needed. You can use Homebrew (https://brew.sh) fo
 You may need to install icu, and make the icu binaries and libraries accessible.
 Please follow [the official instructions of PyICU](https://pypi.org/project/PyICU/) to do so.
 
+If you're struggling to get icu discovered, and see:
+```
+  RuntimeError:
+  Please install pkg-config on your system or set the ICU_VERSION environment
+  variable to the version of ICU you have installed.
+```
+despite it being installed and having your `PATH` updated, you can omit this dependency by
+not specifying `--extras all` to `poetry`. If using postgres, you can install Synapse via
+`poetry install --extras saml2 --extras oidc --extras postgres --extras opentracing --extras redis --extras sentry`.
+ICU is not a hard dependency on getting a working installation.
+
 On ARM-based Macs you may also need to install libjpeg and libpq:
 ```sh
  brew install jpeg libpq

docs/setup/turn/coturn.md

@@ -136,8 +136,8 @@ This will install and start a systemd service called `coturn`.
     NB: If your TLS certificate was provided by Let's Encrypt, TLS/DTLS will
     not work with any Matrix client that uses Chromium's WebRTC library. This
     currently includes Element Android & iOS; for more details, see their
-    [respective](https://github.com/vector-im/element-android/issues/1533)
-    [issues](https://github.com/vector-im/element-ios/issues/2712) as well as the underlying
+    [respective](https://github.com/element-hq/element-android/issues/1533)
+    [issues](https://github.com/element-hq/element-ios/issues/2712) as well as the underlying
     [WebRTC issue](https://bugs.chromium.org/p/webrtc/issues/detail?id=11710).
     Consider using a ZeroSSL certificate for your TURN server as a working alternative.
 

docs/setup/turn/eturnal.md

@@ -137,8 +137,8 @@ must be edited:
     NB: If your TLS certificate was provided by Let's Encrypt, TLS/DTLS will
     not work with any Matrix client that uses Chromium's WebRTC library. This
     currently includes Element Android & iOS; for more details, see their
-    [respective](https://github.com/vector-im/element-android/issues/1533)
-    [issues](https://github.com/vector-im/element-ios/issues/2712) as well as the underlying
+    [respective](https://github.com/element-hq/element-android/issues/1533)
+    [issues](https://github.com/element-hq/element-ios/issues/2712) as well as the underlying
     [WebRTC issue](https://bugs.chromium.org/p/webrtc/issues/detail?id=11710).
     Consider using a ZeroSSL certificate for your TURN server as a working alternative.
 

docs/upgrade.md

@@ -97,6 +97,26 @@ v1.61.0.
 
 <!-- REPLACE_WITH_SCHEMA_VERSIONS -->
 
+## Upgrading from a very old version
+
+You need to read all of the upgrade notes for each version between your current
+version and the latest so that you can update your dependencies, environment,
+config files, etc. if necessary. But you do not need to perform an
+upgrade to each individual version that was missed.
+
+We do not have a list of which versions must be installed. Instead, we recommend
+that you upgrade through each incompatible database schema version, which would
+give you the ability to roll back the maximum number of versions should anything
+go wrong. See [Rolling back to older versions](#rolling-back-to-older-versions)
+above.
+
+Additionally, new versions of Synapse will occasionally run database migrations
+and background updates to update the database. Synapse will not start until
+database migrations are complete. You should wait until background updates from
+each upgrade are complete before moving on to the next upgrade, to avoid
+stacking them up. You can monitor the currently running background updates with
+[the Admin API](usage/administration/admin_api/background_updates.html#status).
+
 # Upgrading to v1.100.0
 
 ## Minimum supported Rust version

docs/usage/administration/admin_faq.md

@@ -120,6 +120,11 @@ for file in $source_directory/*; do
 done
 ```
 
+How do I upgrade from a very old version of Synapse to the latest?
+---
+See [this](../../upgrade.html#upgrading-from-a-very-old-version) section in the
+upgrade docs.
+
 Manually resetting passwords
 ---
 Users can reset their password through their client. Alternatively, a server admin

docs/website_files/version-picker.js

@@ -54,7 +54,7 @@ function fetchVersions(dropdown, dropdownMenu) {
     return new Promise((resolve, reject) => {
         window.addEventListener("load", () => {
 
-            fetch("https://api.github.com/repos/matrix-org/synapse/git/trees/gh-pages", {
+            fetch("https://api.github.com/repos/element-hq/synapse/git/trees/gh-pages", {
                 cache: "force-cache",
             }).then(res => 
                 res.json()
@@ -124,4 +124,4 @@ function changeVersion(url, newVersion) {
     parsedURL.pathname = pathSegments.join('/');
   
     return parsedURL.href;
-}
+}

docs/workers.md

@@ -629,7 +629,7 @@ worker application type.
 
 You can designate generic worker to sending push notifications to
 a [push gateway](https://spec.matrix.org/v1.5/push-gateway-api/) such as
-[sygnal](https://github.com/vector-im/sygnal) and email.
+[sygnal](https://github.com/matrix-org/sygnal) and email.
 
 This will stop the main process sending push notifications.
 

poetry.lock

@@ -46,21 +46,22 @@ wrapt = [
 
 [[package]]
 name = "attrs"
-version = "23.1.0"
+version = "23.2.0"
 description = "Classes Without Boilerplate"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "attrs-23.1.0-py3-none-any.whl", hash = "sha256:1f28b4522cdc2fb4256ac1a020c78acf9cba2c6b461ccd2c126f3aa8e8335d04"},
-    {file = "attrs-23.1.0.tar.gz", hash = "sha256:6279836d581513a26f1bf235f9acd333bc9115683f14f7e8fae46c98fc50e015"},
+    {file = "attrs-23.2.0-py3-none-any.whl", hash = "sha256:99b87a485a5820b23b879f04c2305b44b951b502fd64be915879d77a7e8fc6f1"},
+    {file = "attrs-23.2.0.tar.gz", hash = "sha256:935dc3b529c262f6cf76e50877d35a4bd3c1de194fd41f47a2b7ae8f19971f30"},
 ]
 
 [package.extras]
 cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
-dev = ["attrs[docs,tests]", "pre-commit"]
+dev = ["attrs[tests]", "pre-commit"]
 docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
 tests = ["attrs[tests-no-zope]", "zope-interface"]
-tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
+tests-mypy = ["mypy (>=1.6)", "pytest-mypy-plugins"]
+tests-no-zope = ["attrs[tests-mypy]", "cloudpickle", "hypothesis", "pympler", "pytest (>=4.3.0)", "pytest-xdist[psutil]"]
 
 [[package]]
 name = "authlib"
@@ -110,32 +111,38 @@ pytz = {version = ">=2015.7", markers = "python_version < \"3.9\""}
 
 [[package]]
 name = "bcrypt"
-version = "4.0.1"
+version = "4.1.2"
 description = "Modern password hashing for your software and your servers"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
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+    {file = "bcrypt-4.1.2-cp37-abi3-macosx_10_12_universal2.whl", hash = "sha256:ac621c093edb28200728a9cca214d7e838529e557027ef0581685909acd28b5e"},
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+    {file = "bcrypt-4.1.2.tar.gz", hash = "sha256:33313a1200a3ae90b75587ceac502b048b840fc69e7f7a0905b5f87fac7a1258"},
 ]
 
 [package.extras]
@@ -552,13 +559,13 @@ dev = ["Sphinx", "coverage", "flake8", "lxml", "lxml-stubs", "memory-profiler",
 
 [[package]]
 name = "furo"
-version = "2023.9.10"
+version = "2024.1.29"
 description = "A clean customisable Sphinx documentation theme."
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "furo-2023.9.10-py3-none-any.whl", hash = "sha256:513092538537dc5c596691da06e3c370714ec99bc438680edc1debffb73e5bfc"},
-    {file = "furo-2023.9.10.tar.gz", hash = "sha256:5707530a476d2a63b8cad83b4f961f3739a69f4b058bcf38a03a39fa537195b2"},
+    {file = "furo-2024.1.29-py3-none-any.whl", hash = "sha256:3548be2cef45a32f8cdc0272d415fcb3e5fa6a0eb4ddfe21df3ecf1fe45a13cf"},
+    {file = "furo-2024.1.29.tar.gz", hash = "sha256:4d6b2fe3f10a6e36eb9cc24c1e7beb38d7a23fc7b3c382867503b7fcac8a1e02"},
 ]
 
 [package.dependencies]
@@ -600,100 +607,120 @@ test = ["black", "coverage[toml]", "ddt (>=1.1.1,!=1.4.3)", "mock", "mypy", "pre
 
 [[package]]
 name = "hiredis"
-version = "2.2.3"
+version = "2.3.2"
 description = "Python wrapper for hiredis"
 optional = true
 python-versions = ">=3.7"
 files = [
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 [[package]]
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+version = "4.21.1"
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 [[package]]
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 [[package]]
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+    {file = "pydantic_core-2.16.1.tar.gz", hash = "sha256:daff04257b49ab7f4b3f73f98283d3dbb1a65bf3500d55c7beac3c66c310fe34"},
 ]
 
 [package.dependencies]
@@ -1965,20 +1966,19 @@ typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0"
 
 [[package]]
 name = "pygithub"
-version = "2.1.1"
+version = "2.2.0"
 description = "Use the full Github API v3"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "PyGithub-2.1.1-py3-none-any.whl", hash = "sha256:4b528d5d6f35e991ea5fd3f942f58748f24938805cb7fcf24486546637917337"},
-    {file = "PyGithub-2.1.1.tar.gz", hash = "sha256:ecf12c2809c44147bce63b047b3d2e9dac8a41b63e90fcb263c703f64936b97c"},
+    {file = "PyGithub-2.2.0-py3-none-any.whl", hash = "sha256:41042ea53e4c372219db708c38d2ca1fd4fadab75475bac27d89d339596cfad1"},
+    {file = "PyGithub-2.2.0.tar.gz", hash = "sha256:e39be7c4dc39418bdd6e3ecab5931c636170b8b21b4d26f9ecf7e6102a3b51c3"},
 ]
 
 [package.dependencies]
 Deprecated = "*"
 pyjwt = {version = ">=2.4.0", extras = ["crypto"]}
 pynacl = ">=1.4.0"
-python-dateutil = "*"
 requests = ">=2.14.0"
 typing-extensions = ">=4.0.0"
 urllib3 = ">=1.26.0"
@@ -2081,17 +2081,17 @@ tests = ["hypothesis (>=3.27.0)", "pytest (>=3.2.1,!=3.3.0)"]
 
 [[package]]
 name = "pyopenssl"
-version = "23.3.0"
+version = "24.0.0"
 description = "Python wrapper module around the OpenSSL library"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "pyOpenSSL-23.3.0-py3-none-any.whl", hash = "sha256:6756834481d9ed5470f4a9393455154bc92fe7a64b7bc6ee2c804e78c52099b2"},
-    {file = "pyOpenSSL-23.3.0.tar.gz", hash = "sha256:6b2cba5cc46e822750ec3e5a81ee12819850b11303630d575e98108a079c2b12"},
+    {file = "pyOpenSSL-24.0.0-py3-none-any.whl", hash = "sha256:ba07553fb6fd6a7a2259adb9b84e12302a9a8a75c44046e8bb5d3e5ee887e3c3"},
+    {file = "pyOpenSSL-24.0.0.tar.gz", hash = "sha256:6aa33039a93fffa4563e655b61d11364d01264be8ccb49906101e02a334530bf"},
 ]
 
 [package.dependencies]
-cryptography = ">=41.0.5,<42"
+cryptography = ">=41.0.5,<43"
 
 [package.extras]
 docs = ["sphinx (!=5.2.0,!=5.2.0.post0,!=7.2.5)", "sphinx-rtd-theme"]
@@ -2125,7 +2125,7 @@ s2repoze = ["paste", "repoze.who", "zope.interface"]
 name = "python-dateutil"
 version = "2.8.2"
 description = "Extensions to the standard Python datetime module"
-optional = false
+optional = true
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
 files = [
     {file = "python-dateutil-2.8.2.tar.gz", hash = "sha256:0123cacc1627ae19ddf3c27a5de5bd67ee4586fbdd6440d9748f8abb483d3e86"},
@@ -2483,13 +2483,13 @@ doc = ["Sphinx", "sphinx-rtd-theme"]
 
 [[package]]
 name = "sentry-sdk"
-version = "1.39.1"
+version = "1.40.3"
 description = "Python client for Sentry (https://sentry.io)"
 optional = true
 python-versions = "*"
 files = [
-    {file = "sentry-sdk-1.39.1.tar.gz", hash = "sha256:320a55cdf9da9097a0bead239c35b7e61f53660ef9878861824fd6d9b2eaf3b5"},
-    {file = "sentry_sdk-1.39.1-py2.py3-none-any.whl", hash = "sha256:81b5b9ffdd1a374e9eb0c053b5d2012155db9cbe76393a8585677b753bd5fdc1"},
+    {file = "sentry-sdk-1.40.3.tar.gz", hash = "sha256:3c2b027979bb400cd65a47970e64f8cef8acda86b288a27f42a98692505086cd"},
+    {file = "sentry_sdk-1.40.3-py2.py3-none-any.whl", hash = "sha256:73383f28311ae55602bb6cc3b013830811135ba5521e41333a6e68f269413502"},
 ]
 
 [package.dependencies]
@@ -3070,13 +3070,13 @@ referencing = "*"
 
 [[package]]
 name = "types-netaddr"
-version = "0.10.0.20240106"
+version = "1.2.0.20240219"
 description = "Typing stubs for netaddr"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "types-netaddr-0.10.0.20240106.tar.gz", hash = "sha256:7cc6c16bc76f57faf4a042184f748a05e9642b189caf7fe7e36c07cb87c057b3"},
-    {file = "types_netaddr-0.10.0.20240106-py3-none-any.whl", hash = "sha256:0acd8116293b06abe66484cf033c2d597f039326c28e3df83b8abd5709f6c65d"},
+    {file = "types-netaddr-1.2.0.20240219.tar.gz", hash = "sha256:984e70ad838218d3032f37f05a7e294f7b007fe274ec9d774265c8c06698395f"},
+    {file = "types_netaddr-1.2.0.20240219-py3-none-any.whl", hash = "sha256:b26144e878acb8a1a9008e6997863714db04f8029a0f7f6bfe483c977d21b522"},
 ]
 
 [[package]]
@@ -3092,13 +3092,13 @@ files = [
 
 [[package]]
 name = "types-pillow"
-version = "10.1.0.2"
+version = "10.2.0.20240125"
 description = "Typing stubs for Pillow"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "types-Pillow-10.1.0.2.tar.gz", hash = "sha256:525c1c5ee67b0ac1721c40d2bc618226ef2123c347e527e14e05b920721a13b9"},
-    {file = "types_Pillow-10.1.0.2-py3-none-any.whl", hash = "sha256:131078ffa547bf9a201d39ffcdc65633e108148085f4f1b07d4647fcfec6e923"},
+    {file = "types-Pillow-10.2.0.20240125.tar.gz", hash = "sha256:c449b2c43b9fdbe0494a7b950e6b39a4e50516091213fec24ef3f33c1d017717"},
+    {file = "types_Pillow-10.2.0.20240125-py3-none-any.whl", hash = "sha256:322dbae32b4b7918da5e8a47c50ac0f24b0aa72a804a23857620f2722b03c858"},
 ]
 
 [[package]]
@@ -3139,13 +3139,13 @@ files = [
 
 [[package]]
 name = "types-requests"
-version = "2.31.0.10"
+version = "2.31.0.20240125"
 description = "Typing stubs for requests"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "types-requests-2.31.0.10.tar.gz", hash = "sha256:dc5852a76f1eaf60eafa81a2e50aefa3d1f015c34cf0cba130930866b1b22a92"},
-    {file = "types_requests-2.31.0.10-py3-none-any.whl", hash = "sha256:b32b9a86beffa876c0c3ac99a4cd3b8b51e973fb8e3bd4e0a6bb32c7efad80fc"},
+    {file = "types-requests-2.31.0.20240125.tar.gz", hash = "sha256:03a28ce1d7cd54199148e043b2079cdded22d6795d19a2c2a6791a4b2b5e2eb5"},
+    {file = "types_requests-2.31.0.20240125-py3-none-any.whl", hash = "sha256:9592a9a4cb92d6d75d9b491a41477272b710e021011a2a3061157e2fb1f1a5d1"},
 ]
 
 [package.dependencies]
@@ -3153,13 +3153,13 @@ urllib3 = ">=2"
 
 [[package]]
 name = "types-setuptools"
-version = "69.0.0.0"
+version = "69.0.0.20240125"
 description = "Typing stubs for setuptools"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "types-setuptools-69.0.0.0.tar.gz", hash = "sha256:b0a06219f628c6527b2f8ce770a4f47550e00d3e8c3ad83e2dc31bc6e6eda95d"},
-    {file = "types_setuptools-69.0.0.0-py3-none-any.whl", hash = "sha256:8c86195bae2ad81e6dea900a570fe9d64a59dbce2b11cc63c046b03246ea77bf"},
+    {file = "types-setuptools-69.0.0.20240125.tar.gz", hash = "sha256:22ad498cb585b22ce8c97ada1fccdf294a2e0dd7dc984a28535a84ea82f45b3f"},
+    {file = "types_setuptools-69.0.0.20240125-py3-none-any.whl", hash = "sha256:00835f959ff24ebc32c55da8df9d46e8df25e3c4bfacb43e98b61fde51a4bc41"},
 ]
 
 [[package]]
@@ -3434,4 +3434,4 @@ user-search = ["pyicu"]
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.8.0"
-content-hash = "053bda662e95c273f4eda41d7ece8de0e404783ac66d54cdbedc396e196fb63a"
+content-hash = "e4ca55af1dcb6b28b8064b7551008fd16f6cdfa9cb9bf90d18c6b47766b56ae6"

pyproject.toml

@@ -96,7 +96,7 @@ module-name = "synapse.synapse_rust"
 
 [tool.poetry]
 name = "matrix-synapse"
-version = "1.100.0rc3"
+version = "1.103.0"
 description = "Homeserver for the Matrix decentralised comms protocol"
 authors = ["Matrix.org Team and Contributors <packages@matrix.org>"]
 license = "AGPL-3.0-or-later"
@@ -372,7 +372,7 @@ optional = true
 sphinx = {version = "^6.1", python = "^3.8"}
 sphinx-autodoc2 = {version = ">=0.4.2,<0.6.0", python = "^3.8"}
 myst-parser = {version = "^1.0.0", python = "^3.8"}
-furo = ">=2022.12.7,<2024.0.0"
+furo = ">=2022.12.7,<2025.0.0"
 
 
 [build-system]

scripts-dev/release.py

@@ -660,7 +660,7 @@ def _announce() -> None:
 Hi everyone. Synapse {current_version} has just been released.
 
 [notes](https://github.com/element-hq/synapse/releases/tag/{tag_name}) | \
-[docker](https://hub.docker.com/r/vectorim/synapse/tags?name={tag_name}) | \
+[docker](https://hub.docker.com/r/matrixdotorg/synapse/tags?name={tag_name}) | \
 [debs](https://packages.matrix.org/debian/) | \
 [pypi](https://pypi.org/project/matrix-synapse/{current_version}/)"""
     )

synapse/api/errors.py

@@ -517,8 +517,6 @@ class InvalidCaptchaError(SynapseError):
 class LimitExceededError(SynapseError):
     """A client has sent too many requests and is being throttled."""
 
-    include_retry_after_header = False
-
     def __init__(
         self,
         limiter_name: str,
@@ -526,9 +524,10 @@ class LimitExceededError(SynapseError):
         retry_after_ms: Optional[int] = None,
         errcode: str = Codes.LIMIT_EXCEEDED,
     ):
+        # Use HTTP header Retry-After to enable library-assisted retry handling.
         headers = (
             {"Retry-After": str(math.ceil(retry_after_ms / 1000))}
-            if self.include_retry_after_header and retry_after_ms is not None
+            if retry_after_ms is not None
             else None
         )
         super().__init__(code, "Too Many Requests", errcode, headers=headers)

synapse/config/experimental.py

@@ -25,7 +25,6 @@ from typing import TYPE_CHECKING, Any, Optional
 import attr
 import attr.validators
 
-from synapse.api.errors import LimitExceededError
 from synapse.api.room_versions import KNOWN_ROOM_VERSIONS, RoomVersions
 from synapse.config import ConfigError
 from synapse.config._base import Config, RootConfig
@@ -415,14 +414,6 @@ class ExperimentalConfig(Config):
             "msc4010_push_rules_account_data", False
         )
 
-        # MSC4041: Use HTTP header Retry-After to enable library-assisted retry handling
-        #
-        # This is a bit hacky, but the most reasonable way to *alway* include the
-        # headers.
-        LimitExceededError.include_retry_after_header = experimental.get(
-            "msc4041_enabled", False
-        )
-
         self.msc4028_push_encrypted_events = experimental.get(
             "msc4028_push_encrypted_events", False
         )

synapse/config/registration.py

@@ -237,6 +237,14 @@ class RegistrationConfig(Config):
 
         self.inhibit_user_in_use_error = config.get("inhibit_user_in_use_error", False)
 
+        # List of user IDs not to send out device list updates for when they
+        # register new devices. This is useful to handle bot accounts.
+        #
+        # Note: This will still send out device list updates if the device is
+        # later updated, e.g. end to end keys are added.
+        dont_notify_new_devices_for = config.get("dont_notify_new_devices_for", [])
+        self.dont_notify_new_devices_for = frozenset(dont_notify_new_devices_for)
+
     def generate_config_section(
         self, generate_secrets: bool = False, **kwargs: Any
     ) -> str:

synapse/crypto/keyring.py

@@ -839,11 +839,12 @@ class ServerKeyFetcher(BaseV2KeyFetcher):
             Map from server_name -> key_id -> FetchKeyResult
         """
 
+        # We only need to do one request per server.
+        servers_to_fetch = {k.server_name for k in keys_to_fetch}
+
         results = {}
 
-        async def get_keys(key_to_fetch_item: _FetchKeyRequest) -> None:
-            server_name = key_to_fetch_item.server_name
-
+        async def get_keys(server_name: str) -> None:
             try:
                 keys = await self.get_server_verify_keys_v2_direct(server_name)
                 results[server_name] = keys
@@ -852,7 +853,7 @@ class ServerKeyFetcher(BaseV2KeyFetcher):
             except Exception:
                 logger.exception("Error getting keys from %s", server_name)
 
-        await yieldable_gather_results(get_keys, keys_to_fetch)
+        await yieldable_gather_results(get_keys, servers_to_fetch)
         return results
 
     async def get_server_verify_keys_v2_direct(

synapse/event_auth.py

@@ -23,7 +23,20 @@
 import collections.abc
 import logging
 import typing
-from typing import Any, Dict, Iterable, List, Mapping, Optional, Set, Tuple, Union
+from typing import (
+    Any,
+    ChainMap,
+    Dict,
+    Iterable,
+    List,
+    Mapping,
+    MutableMapping,
+    Optional,
+    Set,
+    Tuple,
+    Union,
+    cast,
+)
 
 from canonicaljson import encode_canonical_json
 from signedjson.key import decode_verify_key_bytes
@@ -175,12 +188,22 @@ async def check_state_independent_auth_rules(
         return
 
     # 2. Reject if event has auth_events that: ...
+    auth_events: ChainMap[str, EventBase] = ChainMap()
     if batched_auth_events:
-        # Copy the batched auth events to avoid mutating them.
-        auth_events = dict(batched_auth_events)
-        needed_auth_event_ids = set(event.auth_event_ids()) - batched_auth_events.keys()
+        # batched_auth_events can become very large. To avoid repeatedly copying it, which
+        # would significantly impact performance, we use a ChainMap.
+        # batched_auth_events must be cast to MutableMapping because .new_child() requires
+        # this type. This casting is safe as the mapping is never mutated.
+        auth_events = auth_events.new_child(
+            cast(MutableMapping[str, "EventBase"], batched_auth_events)
+        )
+        needed_auth_event_ids = [
+            event_id
+            for event_id in event.auth_event_ids()
+            if event_id not in batched_auth_events
+        ]
         if needed_auth_event_ids:
-            auth_events.update(
+            auth_events = auth_events.new_child(
                 await store.get_events(
                     needed_auth_event_ids,
                     redact_behaviour=EventRedactBehaviour.as_is,
@@ -188,10 +211,12 @@ async def check_state_independent_auth_rules(
                 )
             )
     else:
-        auth_events = await store.get_events(
-            event.auth_event_ids(),
-            redact_behaviour=EventRedactBehaviour.as_is,
-            allow_rejected=True,
+        auth_events = auth_events.new_child(
+            await store.get_events(
+                event.auth_event_ids(),
+                redact_behaviour=EventRedactBehaviour.as_is,
+                allow_rejected=True,
+            )
         )
 
     room_id = event.room_id

synapse/handlers/device.py

@@ -429,6 +429,10 @@ class DeviceHandler(DeviceWorkerHandler):
         self._storage_controllers = hs.get_storage_controllers()
         self.db_pool = hs.get_datastores().main.db_pool
 
+        self._dont_notify_new_devices_for = (
+            hs.config.registration.dont_notify_new_devices_for
+        )
+
         self.device_list_updater = DeviceListUpdater(hs, self)
 
         federation_registry = hs.get_federation_registry()
@@ -505,6 +509,9 @@ class DeviceHandler(DeviceWorkerHandler):
 
         self._check_device_name_length(initial_device_display_name)
 
+        # Check if we should send out device lists updates for this new device.
+        notify = user_id not in self._dont_notify_new_devices_for
+
         if device_id is not None:
             new_device = await self.store.store_device(
                 user_id=user_id,
@@ -514,7 +521,8 @@ class DeviceHandler(DeviceWorkerHandler):
                 auth_provider_session_id=auth_provider_session_id,
             )
             if new_device:
-                await self.notify_device_update(user_id, [device_id])
+                if notify:
+                    await self.notify_device_update(user_id, [device_id])
             return device_id
 
         # if the device id is not specified, we'll autogen one, but loop a few
@@ -530,7 +538,8 @@ class DeviceHandler(DeviceWorkerHandler):
                 auth_provider_session_id=auth_provider_session_id,
             )
             if new_device:
-                await self.notify_device_update(user_id, [new_device_id])
+                if notify:
+                    await self.notify_device_update(user_id, [new_device_id])
                 return new_device_id
             attempts += 1
 

synapse/handlers/federation_event.py

@@ -1757,17 +1757,25 @@ class FederationEventHandler:
 
             events_and_contexts_to_persist.append((event, context))
 
-        for event in sorted_auth_events:
+        for i, event in enumerate(sorted_auth_events):
             await prep(event)
 
-        await self.persist_events_and_notify(
-            room_id,
-            events_and_contexts_to_persist,
-            # Mark these events backfilled as they're historic events that will
-            # eventually be backfilled. For example, missing events we fetch
-            # during backfill should be marked as backfilled as well.
-            backfilled=True,
-        )
+            # The above function is typically not async, and so won't yield to
+            # the reactor. For large rooms let's yield to the reactor
+            # occasionally to ensure we don't block other work.
+            if (i + 1) % 1000 == 0:
+                await self._clock.sleep(0)
+
+        # Also persist the new event in batches for similar reasons as above.
+        for batch in batch_iter(events_and_contexts_to_persist, 1000):
+            await self.persist_events_and_notify(
+                room_id,
+                batch,
+                # Mark these events as backfilled as they're historic events that will
+                # eventually be backfilled. For example, missing events we fetch
+                # during backfill should be marked as backfilled as well.
+                backfilled=True,
+            )
 
     @trace
     async def _check_event_auth(

synapse/media/oembed.py

@@ -256,12 +256,11 @@ def calc_description_and_urls(open_graph_response: JsonDict, html_body: str) ->
     parser = etree.HTMLParser(recover=True, encoding="utf-8")
 
     # Attempt to parse the body. If this fails, log and return no metadata.
-    # TODO Develop of lxml-stubs has this correct.
-    tree = etree.fromstring(html_body, parser)  # type: ignore[arg-type]
+    tree = etree.fromstring(html_body, parser)
 
     # The data was successfully parsed, but no tree was found.
     if tree is None:
-        return  # type: ignore[unreachable]
+        return
 
     # Attempt to find interesting URLs (images, videos, embeds).
     if "og:image" not in open_graph_response:

synapse/media/preview_html.py

@@ -160,8 +160,7 @@ def decode_body(
 
     # Attempt to parse the body. Returns None if the body was successfully
     # parsed, but no tree was found.
-    # TODO Develop of lxml-stubs has this correct.
-    return etree.fromstring(body, parser)  # type: ignore[arg-type]
+    return etree.fromstring(body, parser)
 
 
 def _get_meta_tags(

synapse/module_api/callbacks/third_party_event_rules_callbacks.py

@@ -366,7 +366,7 @@ class ThirdPartyEventRulesModuleApiCallbacks:
         if len(self._check_threepid_can_be_invited_callbacks) == 0:
             return True
 
-        state_events = await self._get_state_map_for_room(room_id)
+        state_events = await self._storage_controllers.state.get_current_state(room_id)
 
         for callback in self._check_threepid_can_be_invited_callbacks:
             try:
@@ -399,7 +399,7 @@ class ThirdPartyEventRulesModuleApiCallbacks:
         if len(self._check_visibility_can_be_modified_callbacks) == 0:
             return True
 
-        state_events = await self._get_state_map_for_room(room_id)
+        state_events = await self._storage_controllers.state.get_current_state(room_id)
 
         for callback in self._check_visibility_can_be_modified_callbacks:
             try:
@@ -427,7 +427,13 @@ class ThirdPartyEventRulesModuleApiCallbacks:
             return
 
         event = await self.store.get_event(event_id)
-        state_events = await self._get_state_map_for_room(event.room_id)
+
+        # We *don't* want to wait for the full state here, because waiting for full
+        # state will persist event, which in turn will call this method.
+        # This would end up in a deadlock.
+        state_events = await self._storage_controllers.state.get_current_state(
+            event.room_id, await_full_state=False
+        )
 
         for callback in self._on_new_event_callbacks:
             try:
@@ -490,17 +496,6 @@ class ThirdPartyEventRulesModuleApiCallbacks:
                 )
         return True
 
-    async def _get_state_map_for_room(self, room_id: str) -> StateMap[EventBase]:
-        """Given a room ID, return the state events of that room.
-
-        Args:
-            room_id: The ID of the room.
-
-        Returns:
-            A dict mapping (event type, state key) to state event.
-        """
-        return await self._storage_controllers.state.get_current_state(room_id)
-
     async def on_profile_update(
         self, user_id: str, new_profile: ProfileInfo, by_admin: bool, deactivation: bool
     ) -> None:

synapse/push/mailer.py

@@ -26,6 +26,7 @@ from typing import TYPE_CHECKING, Dict, Iterable, List, Optional, TypeVar
 import bleach
 import jinja2
 from markupsafe import Markup
+from prometheus_client import Counter
 
 from synapse.api.constants import EventTypes, Membership, RoomTypes
 from synapse.api.errors import StoreError
@@ -56,6 +57,12 @@ logger = logging.getLogger(__name__)
 
 T = TypeVar("T")
 
+emails_sent_counter = Counter(
+    "synapse_emails_sent_total",
+    "Emails sent by type",
+    ["type"],
+)
+
 
 CONTEXT_BEFORE = 1
 CONTEXT_AFTER = 1
@@ -130,6 +137,8 @@ class Mailer:
 
         logger.info("Created Mailer for app_name %s" % app_name)
 
+    emails_sent_counter.labels("password_reset")
+
     async def send_password_reset_mail(
         self, email_address: str, token: str, client_secret: str, sid: str
     ) -> None:
@@ -153,6 +162,8 @@ class Mailer:
 
         template_vars: TemplateVars = {"link": link}
 
+        emails_sent_counter.labels("password_reset").inc()
+
         await self.send_email(
             email_address,
             self.email_subjects.password_reset
@@ -160,6 +171,8 @@ class Mailer:
             template_vars,
         )
 
+    emails_sent_counter.labels("registration")
+
     async def send_registration_mail(
         self, email_address: str, token: str, client_secret: str, sid: str
     ) -> None:
@@ -183,6 +196,8 @@ class Mailer:
 
         template_vars: TemplateVars = {"link": link}
 
+        emails_sent_counter.labels("registration").inc()
+
         await self.send_email(
             email_address,
             self.email_subjects.email_validation
@@ -190,6 +205,8 @@ class Mailer:
             template_vars,
         )
 
+    emails_sent_counter.labels("add_threepid")
+
     async def send_add_threepid_mail(
         self, email_address: str, token: str, client_secret: str, sid: str
     ) -> None:
@@ -214,6 +231,8 @@ class Mailer:
 
         template_vars: TemplateVars = {"link": link}
 
+        emails_sent_counter.labels("add_threepid").inc()
+
         await self.send_email(
             email_address,
             self.email_subjects.email_validation
@@ -221,6 +240,8 @@ class Mailer:
             template_vars,
         )
 
+    emails_sent_counter.labels("notification")
+
     async def send_notification_mail(
         self,
         app_id: str,
@@ -315,6 +336,8 @@ class Mailer:
             "reason": reason,
         }
 
+        emails_sent_counter.labels("notification").inc()
+
         await self.send_email(
             email_address, summary_text, template_vars, unsubscribe_link
         )

synapse/push/push_tools.py

@@ -29,11 +29,17 @@ from synapse.storage.databases.main import DataStore
 
 async def get_badge_count(store: DataStore, user_id: str, group_by_room: bool) -> int:
     invites = await store.get_invited_rooms_for_local_user(user_id)
+    joins = await store.get_rooms_for_user(user_id)
 
     badge = len(invites)
 
     room_to_count = await store.get_unread_counts_by_room_for_user(user_id)
-    for _room_id, notify_count in room_to_count.items():
+    for room_id, notify_count in room_to_count.items():
+        # room_to_count may include rooms which the user has left,
+        # ignore those.
+        if room_id not in joins:
+            continue
+
         if notify_count == 0:
             continue
 

synapse/rest/admin/__init__.py

@@ -109,6 +109,7 @@ from synapse.rest.admin.users import (
     UserReplaceMasterCrossSigningKeyRestServlet,
     UserRestServletV2,
     UsersRestServletV2,
+    UsersRestServletV3,
     UserTokenRestServlet,
     WhoisRestServlet,
 )
@@ -289,6 +290,7 @@ def register_servlets(hs: "HomeServer", http_server: HttpServer) -> None:
         UserTokenRestServlet(hs).register(http_server)
     UserRestServletV2(hs).register(http_server)
     UsersRestServletV2(hs).register(http_server)
+    UsersRestServletV3(hs).register(http_server)
     UserMediaStatisticsRestServlet(hs).register(http_server)
     LargestRoomsStatistics(hs).register(http_server)
     EventReportDetailRestServlet(hs).register(http_server)

synapse/rest/admin/users.py

@@ -23,7 +23,7 @@ import hmac
 import logging
 import secrets
 from http import HTTPStatus
-from typing import TYPE_CHECKING, Dict, List, Optional, Tuple
+from typing import TYPE_CHECKING, Dict, List, Optional, Tuple, Union
 
 import attr
 
@@ -118,7 +118,8 @@ class UsersRestServletV2(RestServlet):
                 errcode=Codes.INVALID_PARAM,
             )
 
-        deactivated = parse_boolean(request, "deactivated", default=False)
+        deactivated = self._parse_parameter_deactivated(request)
+
         locked = parse_boolean(request, "locked", default=False)
         admins = parse_boolean(request, "admins")
 
@@ -182,6 +183,22 @@ class UsersRestServletV2(RestServlet):
 
         return HTTPStatus.OK, ret
 
+    def _parse_parameter_deactivated(self, request: SynapseRequest) -> Optional[bool]:
+        """
+        Return None (no filtering) if `deactivated` is `true`, otherwise return `False`
+        (exclude deactivated users from the results).
+        """
+        return None if parse_boolean(request, "deactivated") else False
+
+
+class UsersRestServletV3(UsersRestServletV2):
+    PATTERNS = admin_patterns("/users$", "v3")
+
+    def _parse_parameter_deactivated(
+        self, request: SynapseRequest
+    ) -> Union[bool, None]:
+        return parse_boolean(request, "deactivated")
+
 
 class UserRestServletV2(RestServlet):
     PATTERNS = admin_patterns("/users/(?P<user_id>[^/]*)$", "v2")

synapse/rest/client/relations.py

@@ -71,7 +71,7 @@ class RelationPaginationServlet(RestServlet):
             self._store, request, default_limit=5, default_dir=Direction.BACKWARDS
         )
         if self._support_recurse:
-            recurse = parse_boolean(
+            recurse = parse_boolean(request, "recurse", default=False) or parse_boolean(
                 request, "org.matrix.msc3981.recurse", default=False
             )
         else:

synapse/storage/controllers/state.py

@@ -562,10 +562,15 @@ class StateStorageController:
     @trace
     @tag_args
     async def get_current_state(
-        self, room_id: str, state_filter: Optional[StateFilter] = None
+        self,
+        room_id: str,
+        state_filter: Optional[StateFilter] = None,
+        await_full_state: bool = True,
     ) -> StateMap[EventBase]:
         """Same as `get_current_state_ids` but also fetches the events"""
-        state_map_ids = await self.get_current_state_ids(room_id, state_filter)
+        state_map_ids = await self.get_current_state_ids(
+            room_id, state_filter, await_full_state
+        )
 
         event_map = await self.stores.main.get_events(list(state_map_ids.values()))
 

synapse/storage/databases/main/__init__.py

@@ -176,7 +176,7 @@ class DataStore(
         user_id: Optional[str] = None,
         name: Optional[str] = None,
         guests: bool = True,
-        deactivated: bool = False,
+        deactivated: Optional[bool] = None,
         admins: Optional[bool] = None,
         order_by: str = UserSortOrder.NAME.value,
         direction: Direction = Direction.FORWARDS,
@@ -232,8 +232,11 @@ class DataStore(
             if not guests:
                 filters.append("is_guest = 0")
 
-            if not deactivated:
-                filters.append("deactivated = 0")
+            if deactivated is not None:
+                if deactivated:
+                    filters.append("deactivated = 1")
+                else:
+                    filters.append("deactivated = 0")
 
             if not locked:
                 filters.append("locked IS FALSE")

synapse/storage/databases/main/cache.py

@@ -373,7 +373,7 @@ class CacheInvalidationWorkerStore(SQLBaseStore):
         deleted.
         """
 
-        self._invalidate_local_get_event_cache_all()  # type: ignore[attr-defined]
+        self._invalidate_local_get_event_cache_room_id(room_id)  # type: ignore[attr-defined]
 
         self._attempt_to_invalidate_cache("have_seen_event", (room_id,))
         self._attempt_to_invalidate_cache("get_latest_event_ids_in_room", (room_id,))

synapse/storage/databases/main/event_federation.py

@@ -310,7 +310,7 @@ class EventFederationWorkerStore(SignatureWorkerStore, EventsWorkerStore, SQLBas
         # Add all linked chains reachable from initial set of chains.
         chains_to_fetch = set(event_chains.keys())
         while chains_to_fetch:
-            batch2 = tuple(itertools.islice(chains_to_fetch, 100))
+            batch2 = tuple(itertools.islice(chains_to_fetch, 1000))
             chains_to_fetch.difference_update(batch2)
             clause, args = make_in_list_sql_clause(
                 txn.database_engine, "origin_chain_id", batch2
@@ -593,7 +593,7 @@ class EventFederationWorkerStore(SignatureWorkerStore, EventsWorkerStore, SQLBas
         # the loop)
         chains_to_fetch = set(seen_chains)
         while chains_to_fetch:
-            batch2 = tuple(itertools.islice(chains_to_fetch, 100))
+            batch2 = tuple(itertools.islice(chains_to_fetch, 1000))
             clause, args = make_in_list_sql_clause(
                 txn.database_engine, "origin_chain_id", batch2
             )

synapse/storage/databases/main/event_push_actions.py

@@ -358,6 +358,10 @@ class EventPushActionsWorkerStore(ReceiptsWorkerStore, StreamWorkerStore, SQLBas
         This function is intentionally not cached because it is called to calculate the
         unread badge for push notifications and thus the result is expected to change.
 
+        Note that this function assumes the user is a member of the room. Because
+        summary rows are not removed when a user leaves a room, the caller must
+        filter out those results from the result.
+
         Returns:
             A map of room ID to notification counts for the given user.
         """
@@ -370,170 +374,127 @@ class EventPushActionsWorkerStore(ReceiptsWorkerStore, StreamWorkerStore, SQLBas
     def _get_unread_counts_by_room_for_user_txn(
         self, txn: LoggingTransaction, user_id: str
     ) -> Dict[str, int]:
-        # To get the badge count of all rooms we need to make three queries:
-        #   1. Fetch all counts from `event_push_summary`, discarding any stale
-        #      rooms.
-        #   2. Fetch all notifications from `event_push_actions` that haven't
-        #      been rotated yet.
-        #   3. Fetch all notifications from `event_push_actions` for the stale
-        #      rooms.
-        #
-        # The "stale room" scenario generally happens when there is a new read
-        # receipt that hasn't yet been processed to update the
-        # `event_push_summary` table. When that happens we ignore the
-        # `event_push_summary` table for that room and calculate the count
-        # manually from `event_push_actions`.
-
-        # We need to only take into account read receipts of these types.
-        receipt_types_clause, receipt_types_args = make_in_list_sql_clause(
+        receipt_types_clause, args = make_in_list_sql_clause(
             self.database_engine,
             "receipt_type",
             (ReceiptTypes.READ, ReceiptTypes.READ_PRIVATE),
         )
+        args.extend([user_id, user_id])
 
-        # Step 1, fetch all counts from `event_push_summary` for the user. This
-        # is slightly convoluted as we also need to pull out the stream ordering
-        # of the most recent receipt of the user in the room (either a thread
-        # aware receipt or thread unaware receipt) in order to determine
-        # whether the row in `event_push_summary` is stale. Hence the outer
-        # GROUP BY and odd join condition against `receipts_linearized`.
-        sql = f"""
-            SELECT room_id, notif_count, stream_ordering, thread_id, last_receipt_stream_ordering,
-                MAX(receipt_stream_ordering)
-            FROM (
-                SELECT e.room_id, notif_count, e.stream_ordering, e.thread_id, last_receipt_stream_ordering,
-                    ev.stream_ordering AS receipt_stream_ordering
-                FROM event_push_summary AS e
-                INNER JOIN local_current_membership USING (user_id, room_id)
-                LEFT JOIN receipts_linearized AS r ON (
-                    e.user_id = r.user_id
-                    AND e.room_id = r.room_id
-                    AND (e.thread_id = r.thread_id OR r.thread_id IS NULL)
-                    AND {receipt_types_clause}
-                )
-                LEFT JOIN events AS ev ON (r.event_id = ev.event_id)
-                WHERE e.user_id = ? and notif_count > 0
-            ) AS es
-            GROUP BY room_id, notif_count, stream_ordering, thread_id, last_receipt_stream_ordering
+        receipts_cte = f"""
+            WITH all_receipts AS (
+                SELECT room_id, thread_id, MAX(event_stream_ordering) AS max_receipt_stream_ordering
+                FROM receipts_linearized
+                LEFT JOIN events USING (room_id, event_id)
+                WHERE
+                    {receipt_types_clause}
+                    AND user_id = ?
+                GROUP BY room_id, thread_id
+            )
         """
 
-        txn.execute(
-            sql,
-            receipt_types_args
-            + [
-                user_id,
-            ],
-        )
+        receipts_joins = """
+            LEFT JOIN (
+                SELECT room_id, thread_id,
+                max_receipt_stream_ordering AS threaded_receipt_stream_ordering
+                FROM all_receipts
+                WHERE thread_id IS NOT NULL
+            ) AS threaded_receipts USING (room_id, thread_id)
+            LEFT JOIN (
+                SELECT room_id, thread_id,
+                max_receipt_stream_ordering AS unthreaded_receipt_stream_ordering
+                FROM all_receipts
+                WHERE thread_id IS NULL
+            ) AS unthreaded_receipts USING (room_id)
+        """
 
+        # First get summary counts by room / thread for the user. We use the max receipt
+        # stream ordering of both threaded & unthreaded receipts to compare against the
+        # summary table.
+        #
+        # PostgreSQL and SQLite differ in comparing scalar numerics.
+        if isinstance(self.database_engine, PostgresEngine):
+            # GREATEST ignores NULLs.
+            max_clause = """GREATEST(
+                threaded_receipt_stream_ordering,
+                unthreaded_receipt_stream_ordering
+            )"""
+        else:
+            # MAX returns NULL if any are NULL, so COALESCE to 0 first.
+            max_clause = """MAX(
+                COALESCE(threaded_receipt_stream_ordering, 0),
+                COALESCE(unthreaded_receipt_stream_ordering, 0)
+            )"""
+
+        sql = f"""
+            {receipts_cte}
+            SELECT eps.room_id, eps.thread_id, notif_count
+            FROM event_push_summary AS eps
+            {receipts_joins}
+            WHERE user_id = ?
+                AND notif_count != 0
+                AND (
+                    (last_receipt_stream_ordering IS NULL AND stream_ordering > {max_clause})
+                    OR last_receipt_stream_ordering = {max_clause}
+                )
+        """
+        txn.execute(sql, args)
+
+        seen_thread_ids = set()
         room_to_count: Dict[str, int] = defaultdict(int)
-        stale_room_ids = set()
-        for row in txn:
-            room_id = row[0]
-            notif_count = row[1]
-            stream_ordering = row[2]
-            _thread_id = row[3]
-            last_receipt_stream_ordering = row[4]
-            receipt_stream_ordering = row[5]
 
-            if last_receipt_stream_ordering is None:
-                if receipt_stream_ordering is None:
-                    room_to_count[room_id] += notif_count
-                elif stream_ordering > receipt_stream_ordering:
-                    room_to_count[room_id] += notif_count
-                else:
-                    # The latest read receipt from the user is after all the rows for
-                    # this room in `event_push_summary`. We ignore them, and
-                    # calculate the count from `event_push_actions` in step 3.
-                    pass
-            elif last_receipt_stream_ordering == receipt_stream_ordering:
-                room_to_count[room_id] += notif_count
-            else:
-                # The row is stale if `last_receipt_stream_ordering` is set and
-                # *doesn't* match the latest receipt from the user.
-                stale_room_ids.add(room_id)
+        for room_id, thread_id, notif_count in txn:
+            room_to_count[room_id] += notif_count
+            seen_thread_ids.add(thread_id)
 
-        # Discard any stale rooms from `room_to_count`, as we will recalculate
-        # them in step 3.
-        for room_id in stale_room_ids:
-            room_to_count.pop(room_id, None)
+        # Now get any event push actions that haven't been rotated using the same OR
+        # join and filter by receipt and event push summary rotated up to stream ordering.
+        sql = f"""
+            {receipts_cte}
+            SELECT epa.room_id, epa.thread_id, COUNT(CASE WHEN epa.notif = 1 THEN 1 END) AS notif_count
+            FROM event_push_actions AS epa
+            {receipts_joins}
+            WHERE user_id = ?
+                AND epa.notif = 1
+                AND stream_ordering > (SELECT stream_ordering FROM event_push_summary_stream_ordering)
+                AND (threaded_receipt_stream_ordering IS NULL OR stream_ordering > threaded_receipt_stream_ordering)
+                AND (unthreaded_receipt_stream_ordering IS NULL OR stream_ordering > unthreaded_receipt_stream_ordering)
+            GROUP BY epa.room_id, epa.thread_id
+        """
+        txn.execute(sql, args)
 
-        # Step 2, basically the same query, except against `event_push_actions`
-        # and only fetching rows inserted since the last rotation.
-        rotated_upto_stream_ordering = self.db_pool.simple_select_one_onecol_txn(
-            txn,
-            table="event_push_summary_stream_ordering",
-            keyvalues={},
-            retcol="stream_ordering",
+        for room_id, thread_id, notif_count in txn:
+            # Note: only count push actions we have valid summaries for with up to date receipt.
+            if thread_id not in seen_thread_ids:
+                continue
+            room_to_count[room_id] += notif_count
+
+        thread_id_clause, thread_ids_args = make_in_list_sql_clause(
+            self.database_engine, "epa.thread_id", seen_thread_ids
         )
 
+        # Finally re-check event_push_actions for any rooms not in the summary, ignoring
+        # the rotated up-to position. This handles the case where a read receipt has arrived
+        # but not been rotated meaning the summary table is out of date, so we go back to
+        # the push actions table.
         sql = f"""
-            SELECT room_id, thread_id
-            FROM (
-                SELECT e.room_id, e.stream_ordering, e.thread_id,
-                    ev.stream_ordering AS receipt_stream_ordering
-                FROM event_push_actions AS e
-                INNER JOIN local_current_membership USING (user_id, room_id)
-                LEFT JOIN receipts_linearized AS r ON (
-                    e.user_id = r.user_id
-                    AND e.room_id = r.room_id
-                    AND (e.thread_id = r.thread_id OR r.thread_id IS NULL)
-                    AND {receipt_types_clause}
-                )
-                LEFT JOIN events AS ev ON (r.event_id = ev.event_id)
-                WHERE e.user_id = ? and notif > 0
-                    AND e.stream_ordering > ?
-            ) AS es
-            GROUP BY room_id, stream_ordering, thread_id
-            HAVING stream_ordering > COALESCE(MAX(receipt_stream_ordering), 0)
+            {receipts_cte}
+            SELECT epa.room_id, COUNT(CASE WHEN epa.notif = 1 THEN 1 END) AS notif_count
+            FROM event_push_actions AS epa
+            {receipts_joins}
+            WHERE user_id = ?
+            AND NOT {thread_id_clause}
+            AND epa.notif = 1
+            AND (threaded_receipt_stream_ordering IS NULL OR stream_ordering > threaded_receipt_stream_ordering)
+            AND (unthreaded_receipt_stream_ordering IS NULL OR stream_ordering > unthreaded_receipt_stream_ordering)
+            GROUP BY epa.room_id
         """
 
-        txn.execute(
-            sql,
-            receipt_types_args + [user_id, rotated_upto_stream_ordering],
-        )
-        for room_id, _thread_id in txn:
-            # Again, we ignore any stale rooms.
-            if room_id not in stale_room_ids:
-                # For event push actions it is one notification per row.
-                room_to_count[room_id] += 1
+        args.extend(thread_ids_args)
+        txn.execute(sql, args)
 
-        # Step 3, if we have stale rooms then we need to recalculate the counts
-        # from `event_push_actions`. Again, this is basically the same query as
-        # above except without a lower bound on stream ordering and only against
-        # a specific set of rooms.
-        if stale_room_ids:
-            room_id_clause, room_id_args = make_in_list_sql_clause(
-                self.database_engine,
-                "e.room_id",
-                stale_room_ids,
-            )
-
-            sql = f"""
-                SELECT room_id, thread_id
-                FROM (
-                    SELECT e.room_id, e.stream_ordering, e.thread_id,
-                        ev.stream_ordering AS receipt_stream_ordering
-                    FROM event_push_actions AS e
-                    INNER JOIN local_current_membership USING (user_id, room_id)
-                    LEFT JOIN receipts_linearized AS r ON (
-                        e.user_id = r.user_id
-                        AND e.room_id = r.room_id
-                        AND (e.thread_id = r.thread_id OR r.thread_id IS NULL)
-                        AND {receipt_types_clause}
-                    )
-                    LEFT JOIN events AS ev ON (r.event_id = ev.event_id)
-                    WHERE e.user_id = ? and notif > 0
-                        AND {room_id_clause}
-                ) AS es
-                GROUP BY room_id, stream_ordering, thread_id
-                HAVING stream_ordering > COALESCE(MAX(receipt_stream_ordering), 0)
-            """
-            txn.execute(
-                sql,
-                receipt_types_args + [user_id] + room_id_args,
-            )
-            for room_id, _ in txn:
-                room_to_count[room_id] += 1
+        for room_id, notif_count in txn:
+            room_to_count[room_id] += notif_count
 
         return room_to_count
 

synapse/storage/databases/main/events_worker.py

@@ -268,6 +268,8 @@ class EventsWorkerStore(SQLBaseStore):
         ] = AsyncLruCache(
             cache_name="*getEvent*",
             max_size=hs.config.caches.event_cache_size,
+            # `extra_index_cb` Returns a tuple as that is the key type
+            extra_index_cb=lambda _, v: (v.event.room_id,),
         )
 
         # Map from event ID to a deferred that will result in a map from event
@@ -782,9 +784,9 @@ class EventsWorkerStore(SQLBaseStore):
 
         if missing_events_ids:
 
-            async def get_missing_events_from_cache_or_db() -> Dict[
-                str, EventCacheEntry
-            ]:
+            async def get_missing_events_from_cache_or_db() -> (
+                Dict[str, EventCacheEntry]
+            ):
                 """Fetches the events in `missing_event_ids` from the database.
 
                 Also creates entries in `self._current_event_fetches` to allow
@@ -910,12 +912,12 @@ class EventsWorkerStore(SQLBaseStore):
         self._event_ref.pop(event_id, None)
         self._current_event_fetches.pop(event_id, None)
 
-    def _invalidate_local_get_event_cache_all(self) -> None:
-        """Clears the in-memory get event caches.
+    def _invalidate_local_get_event_cache_room_id(self, room_id: str) -> None:
+        """Clears the in-memory get event caches for a room.
 
         Used when we purge room history.
         """
-        self._get_event_cache.clear()
+        self._get_event_cache.invalidate_on_extra_index_local((room_id,))
         self._event_ref.clear()
         self._current_event_fetches.clear()
 

synapse/storage/databases/main/receipts.py

@@ -472,9 +472,24 @@ class ReceiptsWorkerStore(SQLBaseStore):
             event_entry = room_event["content"].setdefault(event_id, {})
             receipt_type_dict = event_entry.setdefault(receipt_type, {})
 
-            receipt_type_dict[user_id] = db_to_json(data)
-            if thread_id:
-                receipt_type_dict[user_id]["thread_id"] = thread_id
+            # MSC4102: always replace threaded receipts with unthreaded ones if there is a clash.
+            # Specifically:
+            # - if there is no existing receipt, great, set the data.
+            # - if there is an existing receipt, is it threaded (thread_id present)?
+            #    YES: replace if this receipt has no thread id. NO: do not replace.
+            # This means we will drop some receipts, but MSC4102 is designed to drop semantically
+            # meaningless receipts, so this is okay. Previously, we would drop meaningful data!
+            receipt_data = db_to_json(data)
+            if user_id in receipt_type_dict:  # existing receipt
+                # is the existing receipt threaded and we are currently processing an unthreaded one?
+                if "thread_id" in receipt_type_dict[user_id] and not thread_id:
+                    receipt_type_dict[
+                        user_id
+                    ] = receipt_data  # replace with unthreaded one
+            else:  # receipt does not exist, just set it
+                receipt_type_dict[user_id] = receipt_data
+                if thread_id:
+                    receipt_type_dict[user_id]["thread_id"] = thread_id
 
         results = {
             room_id: [results[room_id]] if room_id in results else []

synapse/util/caches/lrucache.py

@@ -35,6 +35,7 @@ from typing import (
     Iterable,
     List,
     Optional,
+    Set,
     Tuple,
     Type,
     TypeVar,
@@ -386,6 +387,7 @@ class LruCache(Generic[KT, VT]):
         apply_cache_factor_from_config: bool = True,
         clock: Optional[Clock] = None,
         prune_unread_entries: bool = True,
+        extra_index_cb: Optional[Callable[[KT, VT], KT]] = None,
     ):
         """
         Args:
@@ -416,6 +418,20 @@ class LruCache(Generic[KT, VT]):
             prune_unread_entries: If True, cache entries that haven't been read recently
                 will be evicted from the cache in the background. Set to False to
                 opt-out of this behaviour.
+
+            extra_index_cb: If provided, the cache keeps a second index from a
+                (different) key to a cache entry based on the return value of
+                the callback. This can then be used to invalidate entries based
+                on the second type of key.
+
+                For example, for the event cache this would be a callback that
+                maps an event to its room ID, allowing invalidation of all
+                events in a given room.
+
+                Note: Though the two types of key have the same type, they are
+                in different namespaces.
+
+                Note: The new key does not have to be unique.
         """
         # Default `clock` to something sensible. Note that we rename it to
         # `real_clock` so that mypy doesn't think its still `Optional`.
@@ -463,6 +479,8 @@ class LruCache(Generic[KT, VT]):
 
         lock = threading.Lock()
 
+        extra_index: Dict[KT, Set[KT]] = {}
+
         def evict() -> None:
             while cache_len() > self.max_size:
                 # Get the last node in the list (i.e. the oldest node).
@@ -521,6 +539,11 @@ class LruCache(Generic[KT, VT]):
             if size_callback:
                 cached_cache_len[0] += size_callback(node.value)
 
+            if extra_index_cb:
+                index_key = extra_index_cb(node.key, node.value)
+                mapped_keys = extra_index.setdefault(index_key, set())
+                mapped_keys.add(node.key)
+
             if caches.TRACK_MEMORY_USAGE and metrics:
                 metrics.inc_memory_usage(node.memory)
 
@@ -537,6 +560,14 @@ class LruCache(Generic[KT, VT]):
 
             node.run_and_clear_callbacks()
 
+            if extra_index_cb:
+                index_key = extra_index_cb(node.key, node.value)
+                mapped_keys = extra_index.get(index_key)
+                if mapped_keys is not None:
+                    mapped_keys.discard(node.key)
+                    if not mapped_keys:
+                        extra_index.pop(index_key, None)
+
             if caches.TRACK_MEMORY_USAGE and metrics:
                 metrics.dec_memory_usage(node.memory)
 
@@ -748,6 +779,8 @@ class LruCache(Generic[KT, VT]):
             if size_callback:
                 cached_cache_len[0] = 0
 
+            extra_index.clear()
+
             if caches.TRACK_MEMORY_USAGE and metrics:
                 metrics.clear_memory_usage()
 
@@ -755,6 +788,28 @@ class LruCache(Generic[KT, VT]):
         def cache_contains(key: KT) -> bool:
             return key in cache
 
+        @synchronized
+        def cache_invalidate_on_extra_index(index_key: KT) -> None:
+            """Invalidates all entries that match the given extra index key.
+
+            This can only be called when `extra_index_cb` was specified.
+            """
+
+            assert extra_index_cb is not None
+
+            keys = extra_index.pop(index_key, None)
+            if not keys:
+                return
+
+            for key in keys:
+                node = cache.pop(key, None)
+                if not node:
+                    continue
+
+                evicted_len = delete_node(node)
+                if metrics:
+                    metrics.inc_evictions(EvictionReason.invalidation, evicted_len)
+
         # make sure that we clear out any excess entries after we get resized.
         self._on_resize = evict
 
@@ -771,6 +826,7 @@ class LruCache(Generic[KT, VT]):
         self.len = synchronized(cache_len)
         self.contains = cache_contains
         self.clear = cache_clear
+        self.invalidate_on_extra_index = cache_invalidate_on_extra_index
 
     def __getitem__(self, key: KT) -> VT:
         result = self.get(key, _Sentinel.sentinel)
@@ -864,6 +920,9 @@ class AsyncLruCache(Generic[KT, VT]):
         # This method should invalidate any external cache and then invalidate the LruCache.
         return self._lru_cache.invalidate(key)
 
+    def invalidate_on_extra_index_local(self, index_key: KT) -> None:
+        self._lru_cache.invalidate_on_extra_index(index_key)
+
     def invalidate_local(self, key: KT) -> None:
         """Remove an entry from the local cache
 

tests/api/test_errors.py

@@ -33,18 +33,14 @@ class LimitExceededErrorTestCase(unittest.TestCase):
         self.assertIn("needle", err.debug_context)
         self.assertNotIn("needle", serialised)
 
-    # Create a sub-class to avoid mutating the class-level property.
-    class LimitExceededErrorHeaders(LimitExceededError):
-        include_retry_after_header = True
-
     def test_limit_exceeded_header(self) -> None:
-        err = self.LimitExceededErrorHeaders(limiter_name="test", retry_after_ms=100)
+        err = LimitExceededError(limiter_name="test", retry_after_ms=100)
         self.assertEqual(err.error_dict(None).get("retry_after_ms"), 100)
         assert err.headers is not None
         self.assertEqual(err.headers.get("Retry-After"), "1")
 
     def test_limit_exceeded_rounding(self) -> None:
-        err = self.LimitExceededErrorHeaders(limiter_name="test", retry_after_ms=3001)
+        err = LimitExceededError(limiter_name="test", retry_after_ms=3001)
         self.assertEqual(err.error_dict(None).get("retry_after_ms"), 3001)
         assert err.headers is not None
         self.assertEqual(err.headers.get("Retry-After"), "4")

tests/rest/admin/test_user.py

@@ -503,7 +503,7 @@ class UsersListTestCase(unittest.HomeserverTestCase):
 
         channel = self.make_request(
             "GET",
-            self.url + "?deactivated=true",
+            f"{self.url}?deactivated=true",
             {},
             access_token=self.admin_user_tok,
         )
@@ -982,6 +982,56 @@ class UsersListTestCase(unittest.HomeserverTestCase):
         self.assertEqual(1, channel.json_body["total"])
         self.assertFalse(channel.json_body["users"][0]["admin"])
 
+    def test_filter_deactivated_users(self) -> None:
+        """
+        Tests whether the various values of the query parameter `deactivated` lead to the
+        expected result set.
+        """
+        users_url_v3 = self.url.replace("v2", "v3")
+
+        # Register an additional non admin user
+        user_id = self.register_user("user", "pass", admin=False)
+
+        # Deactivate that user, requesting erasure.
+        deactivate_account_handler = self.hs.get_deactivate_account_handler()
+        self.get_success(
+            deactivate_account_handler.deactivate_account(
+                user_id, erase_data=True, requester=create_requester(user_id)
+            )
+        )
+
+        # Query all users
+        channel = self.make_request(
+            "GET",
+            users_url_v3,
+            access_token=self.admin_user_tok,
+        )
+
+        self.assertEqual(200, channel.code, channel.result)
+        self.assertEqual(2, channel.json_body["total"])
+
+        # Query deactivated users
+        channel = self.make_request(
+            "GET",
+            f"{users_url_v3}?deactivated=true",
+            access_token=self.admin_user_tok,
+        )
+
+        self.assertEqual(200, channel.code, channel.result)
+        self.assertEqual(1, channel.json_body["total"])
+        self.assertEqual("@user:test", channel.json_body["users"][0]["name"])
+
+        # Query non-deactivated users
+        channel = self.make_request(
+            "GET",
+            f"{users_url_v3}?deactivated=false",
+            access_token=self.admin_user_tok,
+        )
+
+        self.assertEqual(200, channel.code, channel.result)
+        self.assertEqual(1, channel.json_body["total"])
+        self.assertEqual("@admin:test", channel.json_body["users"][0]["name"])
+
     @override_config(
         {
             "experimental_features": {
@@ -1130,7 +1180,7 @@ class UsersListTestCase(unittest.HomeserverTestCase):
         # They should appear in the list users API, marked as not erased.
         channel = self.make_request(
             "GET",
-            self.url + "?deactivated=true",
+            f"{self.url}?deactivated=true",
             access_token=self.admin_user_tok,
         )
         users = {user["name"]: user for user in channel.json_body["users"]}
@@ -1194,7 +1244,7 @@ class UsersListTestCase(unittest.HomeserverTestCase):
             dir: The direction of ordering to give the server
         """
 
-        url = self.url + "?deactivated=true&"
+        url = f"{self.url}?deactivated=true&"
         if order_by is not None:
             url += "order_by=%s&" % (order_by,)
         if dir is not None and dir in ("b", "f"):

tests/rest/client/test_login.py

@@ -177,7 +177,6 @@ class LoginRestServletTestCase(unittest.HomeserverTestCase):
                 # rc_login dict here, we need to set this manually as well
                 "account": {"per_second": 10000, "burst_count": 10000},
             },
-            "experimental_features": {"msc4041_enabled": True},
         }
     )
     def test_POST_ratelimiting_per_address(self) -> None:
@@ -229,7 +228,6 @@ class LoginRestServletTestCase(unittest.HomeserverTestCase):
                 # rc_login dict here, we need to set this manually as well
                 "address": {"per_second": 10000, "burst_count": 10000},
             },
-            "experimental_features": {"msc4041_enabled": True},
         }
     )
     def test_POST_ratelimiting_per_account(self) -> None:
@@ -278,7 +276,6 @@ class LoginRestServletTestCase(unittest.HomeserverTestCase):
                 "address": {"per_second": 10000, "burst_count": 10000},
                 "failed_attempts": {"per_second": 0.17, "burst_count": 5},
             },
-            "experimental_features": {"msc4041_enabled": True},
         }
     )
     def test_POST_ratelimiting_per_account_failed_attempts(self) -> None:

tests/util/test_lrucache.py

@@ -383,3 +383,34 @@ class MemoryEvictionTestCase(unittest.HomeserverTestCase):
         # the items should still be in the cache
         self.assertEqual(cache.get("key1"), 1)
         self.assertEqual(cache.get("key2"), 2)
+
+
+class ExtraIndexLruCacheTestCase(unittest.HomeserverTestCase):
+    def test_invalidate_simple(self) -> None:
+        cache: LruCache[str, int] = LruCache(10, extra_index_cb=lambda k, v: str(v))
+        cache["key1"] = 1
+        cache["key2"] = 2
+
+        cache.invalidate_on_extra_index("key1")
+        self.assertEqual(cache.get("key1"), 1)
+        self.assertEqual(cache.get("key2"), 2)
+
+        cache.invalidate_on_extra_index("1")
+        self.assertEqual(cache.get("key1"), None)
+        self.assertEqual(cache.get("key2"), 2)
+
+    def test_invalidate_multi(self) -> None:
+        cache: LruCache[str, int] = LruCache(10, extra_index_cb=lambda k, v: str(v))
+        cache["key1"] = 1
+        cache["key2"] = 1
+        cache["key3"] = 2
+
+        cache.invalidate_on_extra_index("key1")
+        self.assertEqual(cache.get("key1"), 1)
+        self.assertEqual(cache.get("key2"), 1)
+        self.assertEqual(cache.get("key3"), 2)
+
+        cache.invalidate_on_extra_index("1")
+        self.assertEqual(cache.get("key1"), None)
+        self.assertEqual(cache.get("key2"), None)
+        self.assertEqual(cache.get("key3"), 2)